Disease: Colorectal Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs1346044
WRN
0.708 0.440 8 31167138 missense variant T/C snv 0.24 0.23 23
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 16
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13 62
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1800371
TP53
0.742 0.240 17 7676230 missense variant G/A;T snv 1.2E-03 15
rs28934575
TP53
0.641 0.400 17 7674230 missense variant C/A;G;T snv 37
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs3749474
TMEM165 ; CLOCK
0.724 0.320 4 55434518 3 prime UTR variant C/T snv 0.33 17
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs5743708
TLR2
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02 98
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs7904519
TCF7L2
0.763 0.240 10 113014168 intron variant A/G snv 0.55 9
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11571378
RAD52
0.925 0.080 12 950115 intron variant A/C;T snv 2
rs6489769
RAD52
0.851 0.120 12 963799 intron variant C/A;T snv 4